Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CRC rs13224198 chr7:57791107 G/A 1.91E-6 371 23.37 20.58 11.92 KM Plot
CRC rs13224199 chr7:57791111 G/A 1.91E-6 371 23.37 20.58 11.92 KM Plot
CRC rs13224234 chr7:62026956 G/T 5.52E-7 363 22.75 20.05 11.27 KM Plot
CRC rs13229983 chr7:62069745 T/A 7.41E-7 367 23.83 20.23 11.27 KM Plot
CRC rs13230236 chr7:62098032 G/T 6.09E-6 367 24.2 20.27 14.37 KM Plot
CRC rs13230594 chr7:61066883 C/T 1.26E-6 369 23.6 20.27 10.27 KM Plot
CRC rs13230695 chr7:57847541 A/C 6.58E-5 374 11.27 23.12 23.37 KM Plot
CRC rs13231586 chr7:62015308 C/T 8.09E-7 366 23.6 20.23 11.27 KM Plot
CRC rs13231939 chr7:62088878 A/G 3.9E-5 367 24.47 19.87 17.47 KM Plot
CRC rs13231998 chr7:57845775 T/C 1.75E-5 368 23.33 20.38 11.92 KM Plot
CRC rs13232658 chr7:62110998 G/T 6.58E-7 370 24.33 19.93 11.27 KM Plot
CRC rs13233938 chr7:57832092 G/A 1.39E-5 372 23.37 20.3 11.92 KM Plot
CRC rs13235502 chr7:62088981 T/G 3.71E-5 368 24.48 19.87 17.47 KM Plot
CRC rs13235737 chr7:61979160 C/A 8.92E-7 362 22.83 20.38 11.27 KM Plot
CRC rs13236192 chr7:61064013 T/C 1.14E-6 370 23.83 20.27 10.27 KM Plot